euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

203 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip148 chr1 24775512 24775512 + unknown germline validated no 594 NIPAL3
srip1968 chr1 79023145 79023145 + unknown germline validated no 594 .
srip2068 chr1 83609125 83609125 - unknown germline validated no 594 .
srip2896 chr1 102545056 102545056 - unknown germline validated no 594 .
srip3093 chr1 102569114 102569114 + unknown germline validated no 594 .
srip3650 chr1 114976882 114976882 - unknown germline validated no 594 TRIM33
srip4168 chr1 152443698 152443698 - unknown germline validated no 594 .
srip4648 chr1 165531706 165531706 - unknown germline validated no 594 LRRC52;LOC400794
srip5277 chr1 179575197 179575197 - unknown germline validated no 594 TDRD5
srip5861 chr1 192262162 192262162 - unknown germline validated no 594 .
srip7434 chr1 242496596 242496596 + unknown germline validated no 594 PLD5
srip7808 chr10 19065550 19065550 - unknown germline validated no 594 .
srip10481 chr10 91717532 91717532 - unknown germline validated no 594 .
srip11246 chr10 110453931 110453931 + unknown germline validated no 594 .
srip11995 chr10 133016641 133016641 - unknown germline validated no 594 TCERG1L
srip12011 chr10 133528481 133528481 - unknown germline validated no 594 .
srip12576 chr11 15380364 15380364 + unknown germline validated no 594 .
srip12661 chr11 19652293 19652293 - unknown germline validated no 594 NAV2
srip12967 chr11 26159927 26159927 - unknown germline validated no 594 .
srip13287 chr11 30180703 30180703 + unknown germline validated no 594 .
srip13935 chr11 37811369 37811369 + unknown germline validated no 594 .
srip15884 chr11 67599491 67599491 + unknown germline validated no 594 LOC100421859
srip15900 chr11 67777074 67777074 - unknown germline validated no 594 ALDH3B1
srip16492 chr11 83652293 83652293 - unknown germline validated no 594 DLG2
srip16831 chr11 91203062 91203062 - unknown germline validated no 594 .
srip17824 chr11 105479182 105479182 + unknown germline validated no 594 .
srip18297 chr11 114895734 114895734 + unknown germline validated no 594 .
srip18538 chr11 123241906 123241906 + unknown germline validated no 594 .
srip20438 chr12 25775766 25775766 - unknown germline validated no 594 IFLTD1
srip21127 chr12 34017161 34017161 - unknown germline validated no 594 .
srip21946 chr12 42637062 42637062 + unknown germline validated no 594 .
srip22849 chr12 48929157 48929157 + unknown germline validated no 594 .
srip24668 chr12 84965334 84965334 + unknown germline validated no 594 .
srip24942 chr12 85506395 85506395 + unknown germline validated no 594 LRRIQ1
srip25425 chr12 117814367 117814367 - unknown germline validated no 594 .
srip28034 chr13 42771428 42771428 + unknown germline validated no 594 DGKH
srip28511 chr13 61221023 61221023 - unknown germline validated no 594 .
srip35401 chr14 31150525 31150525 - unknown germline validated no 594 SCFD1
srip37080 chr14 51311482 51311482 - unknown germline validated no 594 .
srip37375 chr14 59220500 59220500 + unknown germline validated no 594 .
srip37696 chr14 67419610 67419610 - unknown germline validated no 594 GPHN
srip37967 chr14 68784350 68784350 + unknown germline validated no 594 RAD51B
srip38178 chr14 71197806 71197806 + unknown germline validated no 594 MAP3K9
srip38201 chr14 72333521 72333521 - unknown germline validated no 594 .
srip38433 chr14 86307570 86307570 + unknown germline validated no 594 .
srip38455 chr14 86381662 86381662 - unknown germline validated no 594 .
srip38847 chr14 90497183 90497183 - unknown germline validated no 594 TDP1
srip39119 chr15 25253952 25253952 - unknown germline validated no 594 SNRPN
srip39146 chr15 27875825 27875825 + unknown germline validated no 594 .
srip39597 chr15 35654003 35654003 - unknown germline validated no 594 .
srip39642 chr15 37707731 37707731 - unknown germline validated no 594 .
srip39918 chr15 45567581 45567581 - unknown germline validated no 594 SLC28A2
srip40702 chr15 51189570 51189570 + unknown germline validated no 594 .
srip40750 chr15 51843910 51843910 + unknown germline validated no 594 DMXL2
srip40973 chr15 53956368 53956368 + unknown germline validated no 594 WDR72
srip41272 chr15 56251651 56251651 + unknown germline validated no 594 NEDD4
srip41528 chr15 61328808 61328808 - unknown germline validated no 594 RORA
srip42637 chr15 85649502 85649502 + unknown germline validated no 594 PDE8A
srip43472 chr16 5338879 5338879 + unknown germline validated no 594 .
srip44053 chr16 16934247 16934247 - unknown germline validated no 594 .
srip44456 chr16 22945701 22945701 - unknown germline validated no 594 .
srip44802 chr16 32525376 32525376 - unknown germline validated no 594 .
srip45726 chr16 55292232 55292232 + unknown germline validated no 594 .
srip46484 chr16 89978226 89978226 + unknown germline validated no 594 .
srip47391 chr17 28398481 28398481 + unknown germline validated no 594 EFCAB5
srip47729 chr17 32813910 32813910 + unknown germline validated no 594 .
srip48109 chr17 64551116 64551116 - unknown germline validated no 594 PRKCA
srip48465 chr17 68357562 68357562 + unknown germline validated no 594 .
srip49871 chr18 49216083 49216083 - unknown germline validated no 594 .
srip51021 chr18 59579982 59579982 + unknown germline validated no 594 .
srip51422 chr18 69617399 69617399 + unknown germline validated no 594 .
srip52183 chr19 24602154 24602154 - unknown germline validated no 594 .
srip53175 chr2 22706685 22706685 + unknown germline validated no 594 .
srip53970 chr2 35879443 35879443 + unknown germline validated no 594 .
srip54959 chr2 53460161 53460161 + unknown germline validated no 594 .
srip56638 chr2 92306795 92306795 + unknown germline validated no 594 .
srip56660 chr2 92319432 92319432 - unknown germline validated no 594 .
srip56694 chr2 92324483 92324483 - unknown germline validated no 594 .
srip56801 chr2 106151450 106151450 - unknown germline validated no 594 .
srip56924 chr2 106163220 106163220 + unknown germline validated no 594 .
srip58406 chr2 143370703 143370703 - unknown germline validated no 594 .
srip58598 chr2 144010847 144010847 + unknown germline validated no 594 ARHGAP15
srip59728 chr2 168735299 168735299 - unknown germline validated no 594 .
srip61649 chr2 212707721 212707721 + unknown germline validated no 594 ERBB4
srip62382 chr2 230341968 230341968 + unknown germline validated no 594 DNER
srip62658 chr2 235519844 235519844 + unknown germline validated no 594 .
srip62757 chr20 6105791 6105791 - unknown germline validated no 594 .
srip63342 chr20 16479373 16479373 - unknown germline validated no 594 KIF16B
srip64153 chr20 29591676 29591676 + unknown germline validated no 594 .
srip64615 chr20 41951972 41951972 - unknown germline validated no 594 .
srip65653 chr21 19517214 19517214 - unknown germline validated no 594 .
srip67160 chr22 17246312 17246312 + unknown germline validated no 594 .
srip67260 chr22 19210951 19210951 + unknown germline validated no 594 CLTCL1
srip68598 chr22 44324380 44324380 - unknown germline validated no 594 PNPLA3
srip69835 chr3 3408404 3408404 + unknown germline validated no 594 .
srip70569 chr3 21235006 21235006 + unknown germline validated no 594 .
srip70659 chr3 22440113 22440113 + unknown germline validated no 594 .
srip71952 chr3 38626129 38626129 + unknown germline validated no 594 SCN5A
srip72063 chr3 44300491 44300491 - unknown germline validated no 594 C3orf77
srip72847 chr3 58783947 58783947 + unknown germline validated no 594 C3orf67
srip73505 chr3 65685575 65685575 + unknown germline validated no 594 MAGI1
srip73900 chr3 75670011 75670011 - unknown germline validated no 594 UNC93B3
srip73916 chr3 75691138 75691138 - unknown germline validated no 594 .
srip74068 chr3 79216420 79216420 + unknown germline validated no 594 ROBO1
srip74640 chr3 81990731 81990731 - unknown germline validated no 594 .
srip75635 chr3 85576631 85576631 + unknown germline validated no 594 CADM2
srip75975 chr3 90456520 90456520 - unknown germline validated no 594 .
srip76925 chr3 123033794 123033794 + unknown germline validated no 594 ADCY5
srip77310 chr3 123590896 123590896 + unknown germline validated no 594 MYLK
srip77519 chr3 131069981 131069981 + unknown germline validated no 594 LOC339874
srip78097 chr3 143121667 143121667 - unknown germline validated no 594 SLC9A9
srip78352 chr3 150210561 150210561 - unknown germline validated no 594 .
srip79295 chr3 161145847 161145847 + unknown germline validated no 594 RPL23AP42
srip79905 chr3 169270360 169270360 + unknown germline validated no 594 MECOM
srip81855 chr3 193354030 193354030 - unknown germline validated no 594 OPA1
srip83871 chr4 29322214 29322214 + unknown germline validated no 594 .
srip85488 chr4 58126491 58126491 - unknown germline validated no 594 .
srip85643 chr4 58917248 58917248 - unknown germline validated no 594 .
srip87057 chr4 71093393 71093393 + unknown germline validated no 594 C4orf7
srip87406 chr4 80768650 80768650 + unknown germline validated no 594 GDEP
srip89043 chr4 104214774 104214774 + unknown germline validated no 594 .
srip90371 chr4 115132827 115132827 + unknown germline validated no 594 .
srip91198 chr4 128965197 128965197 - unknown germline validated no 594 .
srip91529 chr4 132181331 132181331 - unknown germline validated no 594 .
srip93300 chr4 151582619 151582619 + unknown germline validated no 594 LRBA
srip93341 chr4 152732601 152732601 - unknown germline validated no 594 .
srip95411 chr4 190659942 190659942 + unknown germline validated no 594 .
srip96108 chr5 9055982 9055982 + unknown germline validated no 594 SEMA5A
srip96828 chr5 20458616 20458616 + unknown germline validated no 594 .
srip97006 chr5 23070279 23070279 + unknown germline validated no 594 .
srip97988 chr5 33797341 33797341 - unknown germline validated no 594 ADAMTS12
srip98409 chr5 41602121 41602121 + unknown germline validated no 594 .
srip99136 chr5 57428108 57428108 + unknown germline validated no 594 .
srip99160 chr5 59591041 59591041 + unknown germline validated no 594 PDE4D
srip99337 chr5 67721751 67721751 + unknown germline validated no 594 .
srip99629 chr5 68618005 68618005 - unknown germline validated no 594 .
srip102665 chr5 112449536 112449536 - unknown germline validated no 594 MCC
srip102913 chr5 124155264 124155264 - unknown germline validated no 594 .
srip103397 chr5 125040179 125040179 + unknown germline validated no 594 .
srip103575 chr5 132934117 132934117 + unknown germline validated no 594 FSTL4
srip104032 chr5 144233373 144233373 - unknown germline validated no 594 .
srip104049 chr5 144330739 144330739 - unknown germline validated no 594 .
srip104882 chr5 155333706 155333706 - unknown germline validated no 594 .
srip105305 chr5 157867170 157867170 - unknown germline validated no 594 .
srip105513 chr5 159351006 159351006 - unknown germline validated no 594 ADRA1B
srip106912 chr6 13135020 13135020 + unknown germline validated no 594 PHACTR1
srip107588 chr6 13503253 13503253 + unknown germline validated no 594 .
srip107655 chr6 18227737 18227737 + unknown germline validated no 594 DEK
srip108155 chr6 36498040 36498040 + unknown germline validated no 594 STK38
srip108366 chr6 45934271 45934271 + unknown germline validated no 594 CLIC5
srip108835 chr6 53285027 53285027 + unknown germline validated no 594 .
srip108974 chr6 56758359 56758359 - unknown germline validated no 594 LOC100652827
srip110347 chr6 73716580 73716580 + unknown germline validated no 594 KCNQ5
srip110585 chr6 77379855 77379855 - unknown germline validated no 594 .
srip111328 chr6 83678042 83678042 - unknown germline validated no 594 UBE2CBP
srip112863 chr6 108786737 108786737 - unknown germline validated no 594 LACE1
srip113446 chr6 125692148 125692148 - unknown germline validated no 594 .
srip113651 chr6 142449929 142449929 - unknown germline validated no 594 .
srip116448 chr7 22783334 22783334 + unknown germline validated no 594 .
srip116511 chr7 25081285 25081285 - unknown germline validated no 594 .
srip116619 chr7 26794974 26794974 + unknown germline validated no 594 SKAP2
srip116805 chr7 34440719 34440719 + unknown germline validated no 594 AAA1
srip118016 chr7 62178856 62178856 + unknown germline validated no 594 .
srip118366 chr7 66590847 66590847 - unknown germline validated no 594 TYW1
srip120404 chr7 88003097 88003097 - unknown germline validated no 594 .
srip121158 chr7 105968058 105968058 + unknown germline validated no 594 .
srip122656 chr7 122124598 122124598 + unknown germline validated no 594 CADPS2
srip123498 chr7 145115410 145115410 - unknown germline validated no 594 .
srip123743 chr7 155158659 155158659 - unknown germline validated no 594 .
srip124848 chr8 11731373 11731373 + unknown germline validated no 594 .
srip124976 chr8 18455923 18455923 + unknown germline validated yes 594 PSD3
srip125276 chr8 24926274 24926274 - unknown germline validated no 594 .
srip125735 chr8 40432892 40432892 - unknown germline validated no 594 ZMAT4
srip125842 chr8 43784668 43784668 + unknown germline validated no 594 .
srip126425 chr8 58348186 58348186 + unknown germline validated no 594 .
srip127033 chr8 72399104 72399104 - unknown germline validated no 594 .
srip128046 chr8 83740734 83740734 + unknown germline validated no 594 .
srip128206 chr8 85428807 85428807 + unknown germline validated no 594 RALYL
srip128868 chr8 112121121 112121121 - unknown germline validated no 594 .
srip129035 chr8 115788352 115788352 - unknown germline validated no 594 .
srip130585 chr9 4265600 4265600 + unknown germline validated no 594 GLIS3
srip131173 chr9 7327229 7327229 - unknown germline validated no 594 .
srip131190 chr9 7426706 7426706 - unknown germline validated no 594 .
srip133898 chr9 70999188 70999188 + unknown germline validated no 594 PGM5
srip134169 chr9 82082611 82082611 - unknown germline validated no 594 .
srip135477 chr9 110018307 110018307 - unknown germline validated no 594 .
srip135608 chr9 111565179 111565179 + unknown germline validated no 594 .
srip136204 chrX 3878925 3878925 - unknown germline validated no 594 .
srip136379 chrX 11953283 11953283 - unknown germline validated yes 594 .
srip136401 chrX 14151668 14151668 - unknown germline validated no 594 .
srip136614 chrX 21300794 21300794 + unknown germline validated no 594 .
srip137372 chrX 55584934 55584934 - unknown germline validated no 594 .
srip137815 chrX 61870985 61870985 + unknown germline validated no 594 .
srip139809 chrX 98920814 98920814 - unknown germline validated no 594 LOC442459
srip140113 chrX 102363307 102363307 + unknown germline validated no 594 .
srip140323 chrX 111557667 111557667 - unknown germline validated no 594 ZCCHC16
srip140664 chrX 119892535 119892535 - unknown germline validated no 594 .
srip141179 chrX 124637032 124637032 - unknown germline validated no 594 .
srip141215 chrX 129525062 129525062 - unknown germline validated no 594 .
srip141587 chrX 136180970 136180970 - unknown germline validated no 594 .
srip142300 chrY 13490753 13490753 + unknown germline validated no 594 .
srip142348 chrY 13878782 13878782 + unknown germline validated no 594 .
srip142492 chrY 58980643 58980643 - unknown germline validated no 594 .